Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.22□□□□□ -0.45
Prrt1O35449 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Prrt1O35449 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.22□□□□□ -0.45
Prrt1O35449 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Prrt1O35449 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.22□□□□□ -0.45
Prrt1O35449 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Prrt1O35449 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.22□□□□□ -0.45
Prrt1O35449 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Prrt1O35449 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Prrt1O35449 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Prrt1O35449 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.21□□□□□ -0.45
Prrt1O35449 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.21□□□□□ -0.45
Prrt1O35449 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Prrt1O35449 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Prrt1O35449 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.21□□□□□ -0.45
Prrt1O35449 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.21□□□□□ -0.45
Prrt1O35449 Gm9726-201ENSMUST00000180321 678 ntBASIC12.21□□□□□ -0.45
Prrt1O35449 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.21□□□□□ -0.45
Prrt1O35449 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.21□□□□□ -0.45
Prrt1O35449 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Prrt1O35449 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prrt1O35449 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prrt1O35449 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.21□□□□□ -0.46
Prrt1O35449 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Prrt1O35449 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Prrt1O35449 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prrt1O35449 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.21□□□□□ -0.46
Prrt1O35449 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prrt1O35449 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.21□□□□□ -0.46
Prrt1O35449 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Prrt1O35449 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prrt1O35449 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Prrt1O35449 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Prrt1O35449 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Prrt1O35449 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Prrt1O35449 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.2□□□□□ -0.46
Prrt1O35449 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Prrt1O35449 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Gm14042-201ENSMUST00000120139 833 ntBASIC12.2□□□□□ -0.46
Prrt1O35449 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Prrt1O35449 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Prrt1O35449 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Prrt1O35449 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Prrt1O35449 Gm7506-201ENSMUST00000207758 815 ntBASIC12.2□□□□□ -0.46
Prrt1O35449 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.2□□□□□ -0.46
Prrt1O35449 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.2□□□□□ -0.46
Prrt1O35449 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Prrt1O35449 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.2□□□□□ -0.46
Prrt1O35449 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prrt1O35449 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms