Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col15a1O35206 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col15a1O35206 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col15a1O35206 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col15a1O35206 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC18.33■□□□□ 0.53
Col15a1O35206 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Col15a1O35206 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col15a1O35206 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.33■□□□□ 0.53
Col15a1O35206 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col15a1O35206 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col15a1O35206 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col15a1O35206 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col15a1O35206 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.33■□□□□ 0.53
Col15a1O35206 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col15a1O35206 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.33■□□□□ 0.53
Col15a1O35206 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col15a1O35206 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col15a1O35206 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col15a1O35206 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col15a1O35206 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col15a1O35206 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.33■□□□□ 0.52
Col15a1O35206 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col15a1O35206 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col15a1O35206 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col15a1O35206 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.32■□□□□ 0.52
Col15a1O35206 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.32■□□□□ 0.52
Col15a1O35206 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.32■□□□□ 0.52
Col15a1O35206 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC18.32■□□□□ 0.52
Col15a1O35206 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Col15a1O35206 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Gm27486-201ENSMUST00000184923 80 ntBASIC18.32■□□□□ 0.52
Col15a1O35206 Gm45784-201ENSMUST00000188360 142 ntBASIC18.32■□□□□ 0.52
Col15a1O35206 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Col15a1O35206 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Gm6091-201ENSMUST00000098307 165 ntBASIC18.32■□□□□ 0.52
Col15a1O35206 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.32■□□□□ 0.52
Col15a1O35206 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col15a1O35206 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col15a1O35206 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col15a1O35206 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.31■□□□□ 0.52
Col15a1O35206 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.31■□□□□ 0.52
Col15a1O35206 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Col15a1O35206 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Gm8927-201ENSMUST00000181978 981 ntBASIC18.31■□□□□ 0.52
Col15a1O35206 Gm29127-201ENSMUST00000188304 517 ntBASIC18.31■□□□□ 0.52
Col15a1O35206 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Gm37424-201ENSMUST00000191727 561 ntBASIC18.31■□□□□ 0.52
Col15a1O35206 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC18.31■□□□□ 0.52
Col15a1O35206 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Gm3222-201ENSMUST00000071282 990 ntBASIC18.31■□□□□ 0.52
Col15a1O35206 Gm10012-201ENSMUST00000078252 192 ntBASIC18.31■□□□□ 0.52
Col15a1O35206 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col15a1O35206 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Col15a1O35206 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.31■□□□□ 0.52
Col15a1O35206 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Zscan30-202ENSMUST00000224144 1458 ntBASIC18.31■□□□□ 0.52
Col15a1O35206 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Col15a1O35206 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col15a1O35206 Snora78-201ENSMUST00000158630 128 ntBASIC18.3■□□□□ 0.52
Col15a1O35206 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC18.3■□□□□ 0.52
Col15a1O35206 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC18.3■□□□□ 0.52
Col15a1O35206 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col15a1O35206 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col15a1O35206 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms