Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trove2O08848 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trove2O08848 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.86□□□□□ -0.03
Trove2O08848 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trove2O08848 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trove2O08848 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.86□□□□□ -0.03
Trove2O08848 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.86□□□□□ -0.03
Trove2O08848 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.86□□□□□ -0.03
Trove2O08848 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.86□□□□□ -0.03
Trove2O08848 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trove2O08848 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trove2O08848 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
Trove2O08848 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trove2O08848 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.85□□□□□ -0.03
Trove2O08848 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trove2O08848 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
Trove2O08848 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.85□□□□□ -0.03
Trove2O08848 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.85□□□□□ -0.03
Trove2O08848 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trove2O08848 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.85□□□□□ -0.03
Trove2O08848 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.85□□□□□ -0.03
Trove2O08848 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trove2O08848 Gm8318-201ENSMUST00000182954 872 ntBASIC14.85□□□□□ -0.03
Trove2O08848 Mir8098-201ENSMUST00000184011 137 ntBASIC14.85□□□□□ -0.03
Trove2O08848 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.85□□□□□ -0.03
Trove2O08848 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trove2O08848 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trove2O08848 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trove2O08848 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trove2O08848 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.85□□□□□ -0.03
Trove2O08848 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trove2O08848 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trove2O08848 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.85□□□□□ -0.03
Trove2O08848 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trove2O08848 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.84□□□□□ -0.03
Trove2O08848 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trove2O08848 Gm7222-201ENSMUST00000117512 906 ntBASIC14.84□□□□□ -0.03
Trove2O08848 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.84□□□□□ -0.03
Trove2O08848 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.84□□□□□ -0.03
Trove2O08848 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.84□□□□□ -0.03
Trove2O08848 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trove2O08848 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.84□□□□□ -0.03
Trove2O08848 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trove2O08848 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms