Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcf11G3X9Z4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Gm29608-201ENSMUST00000190444 463 ntBASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Gm37411-201ENSMUST00000194180 2282 ntBASIC21.55■■□□□ 1.04
Pcf11G3X9Z4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcf11G3X9Z4 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Gm3809-201ENSMUST00000180973 1006 ntBASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Gm11803-201ENSMUST00000119966 444 ntBASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Gm24420-201ENSMUST00000176676 59 ntBASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Gm5276-201ENSMUST00000196683 1047 ntBASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcf11G3X9Z4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Gm9768-201ENSMUST00000206007 2861 ntBASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Pcf11G3X9Z4 Gm11960-202ENSMUST00000181063 2858 ntBASIC21.52■■□□□ 1.03
Pcf11G3X9Z4 Gm16425-201ENSMUST00000118143 3130 ntBASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcf11G3X9Z4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms