Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.98■□□□□ 0.31
Pcdhb9E9Q5G2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Gm46209-201ENSMUST00000217912 553 ntBASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb9E9Q5G2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Gm43703-201ENSMUST00000200523 763 ntBASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb9E9Q5G2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.96■□□□□ 0.3
Pcdhb9E9Q5G2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.96■□□□□ 0.3
Pcdhb9E9Q5G2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb9E9Q5G2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb9E9Q5G2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.96■□□□□ 0.3
Pcdhb9E9Q5G2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb9E9Q5G2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Gm15957-201ENSMUST00000118893 974 ntBASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb9E9Q5G2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms