Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Gm38144-201ENSMUST00000192790 465 ntBASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Gm37497-201ENSMUST00000195830 798 ntBASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a3E9PWQ3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Gm19640-201ENSMUST00000214849 464 ntBASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a3E9PWQ3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Gm7666-201ENSMUST00000146631 819 ntBASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.13□□□□□ -0.15
Col6a3E9PWQ3 Gm12029-201ENSMUST00000120073 832 ntBASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a3E9PWQ3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms