Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm28043E0CXC2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.52□□□□□ -0.08
Gm28043E0CXC2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Gm28043E0CXC2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Gm23547-201ENSMUST00000158210 271 ntBASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm28043E0CXC2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Gm27300-201ENSMUST00000184085 97 ntBASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Gm27335-201ENSMUST00000184758 97 ntBASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm28043E0CXC2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms