Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Gm12957-201ENSMUST00000117835 377 ntBASIC12.94□□□□□ -0.34
Shank1D3YZU1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Gm15806-201ENSMUST00000120696 955 ntBASIC12.94□□□□□ -0.34
Shank1D3YZU1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Mir1982-201ENSMUST00000157368 74 ntBASIC12.94□□□□□ -0.34
Shank1D3YZU1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.94□□□□□ -0.34
Shank1D3YZU1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Celf4-206ENSMUST00000224553 1729 ntBASIC12.94□□□□□ -0.34
Shank1D3YZU1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Gm4984-201ENSMUST00000115987 360 ntBASIC12.94□□□□□ -0.34
Shank1D3YZU1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.94□□□□□ -0.34
Shank1D3YZU1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Gm8062-201ENSMUST00000139696 444 ntBASIC12.93□□□□□ -0.34
Shank1D3YZU1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.93□□□□□ -0.34
Shank1D3YZU1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.93□□□□□ -0.34
Shank1D3YZU1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Gm37230-201ENSMUST00000194491 818 ntBASIC12.93□□□□□ -0.34
Shank1D3YZU1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shank1D3YZU1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Gm37424-201ENSMUST00000191727 561 ntBASIC12.92□□□□□ -0.34
Shank1D3YZU1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.92□□□□□ -0.34
Shank1D3YZU1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Gm19220-201ENSMUST00000222682 803 ntBASIC12.92□□□□□ -0.34
Shank1D3YZU1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms