Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hist1h2acC0HKE2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hist1h2acC0HKE2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hist1h2acC0HKE2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hist1h2acC0HKE2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hist1h2acC0HKE2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hist1h2acC0HKE2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hist1h2acC0HKE2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Hist1h2acC0HKE2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hist1h2acC0HKE2 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.23□□□□□ -0.29
Hist1h2acC0HKE2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hist1h2acC0HKE2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms