Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Clip3B9EHT4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.04□□□□□ -0.16
Clip3B9EHT4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.04□□□□□ -0.16
Clip3B9EHT4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.03□□□□□ -0.16
Clip3B9EHT4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clip3B9EHT4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Clip3B9EHT4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clip3B9EHT4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.02□□□□□ -0.17
Clip3B9EHT4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.02□□□□□ -0.17
Clip3B9EHT4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.02□□□□□ -0.17
Clip3B9EHT4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clip3B9EHT4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms