Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Syce3B5KM66 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Syce3B5KM66 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Syce3B5KM66 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syce3B5KM66 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.55■□□□□ 0.24
Syce3B5KM66 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.55■□□□□ 0.24
Syce3B5KM66 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.55■□□□□ 0.24
Syce3B5KM66 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.55■□□□□ 0.24
Syce3B5KM66 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.55■□□□□ 0.24
Syce3B5KM66 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.55■□□□□ 0.24
Syce3B5KM66 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.55■□□□□ 0.24
Syce3B5KM66 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Syce3B5KM66 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.55■□□□□ 0.24
Syce3B5KM66 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Syce3B5KM66 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Syce3B5KM66 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syce3B5KM66 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Syce3B5KM66 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.54■□□□□ 0.24
Syce3B5KM66 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.54■□□□□ 0.24
Syce3B5KM66 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Syce3B5KM66 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Syce3B5KM66 Gm8749-201ENSMUST00000117737 331 ntBASIC16.54■□□□□ 0.24
Syce3B5KM66 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Syce3B5KM66 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Syce3B5KM66 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syce3B5KM66 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.54■□□□□ 0.24
Syce3B5KM66 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Syce3B5KM66 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.54■□□□□ 0.24
Syce3B5KM66 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Syce3B5KM66 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
Syce3B5KM66 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.53■□□□□ 0.24
Syce3B5KM66 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.53■□□□□ 0.24
Syce3B5KM66 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Syce3B5KM66 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.53■□□□□ 0.24
Syce3B5KM66 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.53■□□□□ 0.24
Syce3B5KM66 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Syce3B5KM66 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Syce3B5KM66 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syce3B5KM66 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms