Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc22a28B2RT89 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.35□□□□□ -0.27
Slc22a28B2RT89 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc22a28B2RT89 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Slc22a28B2RT89 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Slc22a28B2RT89 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc22a28B2RT89 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc22a28B2RT89 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc22a28B2RT89 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Gm16198-201ENSMUST00000118766 670 ntBASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Gm13597-201ENSMUST00000121239 375 ntBASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Mir5126-201ENSMUST00000175513 77 ntBASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Gm27628-201ENSMUST00000184911 107 ntBASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Thap2-203ENSMUST00000218989 527 ntBASIC13.34□□□□□ -0.27
Slc22a28B2RT89 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Gm15590-201ENSMUST00000078419 552 ntBASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.34□□□□□ -0.27
Slc22a28B2RT89 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc22a28B2RT89 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc22a28B2RT89 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Slc22a28B2RT89 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Slc22a28B2RT89 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc22a28B2RT89 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc22a28B2RT89 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc22a28B2RT89 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.33□□□□□ -0.27
Slc22a28B2RT89 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc22a28B2RT89 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.33□□□□□ -0.28
Slc22a28B2RT89 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc22a28B2RT89 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc22a28B2RT89 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc22a28B2RT89 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc22a28B2RT89 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.32□□□□□ -0.28
Slc22a28B2RT89 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc22a28B2RT89 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc22a28B2RT89 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc22a28B2RT89 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc22a28B2RT89 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms