Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm12887B1AVM1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm12887B1AVM1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Gm27646-201ENSMUST00000183989 110 ntBASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm12887B1AVM1 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms