Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm14665-201ENSMUST00000122294 557 ntBASIC11.59□□□□□ -0.55
Chd6A3KFM7 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.59□□□□□ -0.55
Chd6A3KFM7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Gm7600-201ENSMUST00000209657 785 ntBASIC11.59□□□□□ -0.55
Chd6A3KFM7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.59□□□□□ -0.55
Chd6A3KFM7 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.59□□□□□ -0.55
Chd6A3KFM7 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd6A3KFM7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Chd6A3KFM7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Gm7857-201ENSMUST00000117957 358 ntBASIC11.58□□□□□ -0.56
Chd6A3KFM7 Gm11675-201ENSMUST00000121873 832 ntBASIC11.58□□□□□ -0.56
Chd6A3KFM7 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.58□□□□□ -0.56
Chd6A3KFM7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.58□□□□□ -0.56
Chd6A3KFM7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Gm15370-201ENSMUST00000117158 253 ntBASIC11.58□□□□□ -0.56
Chd6A3KFM7 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.58□□□□□ -0.56
Chd6A3KFM7 Gm15460-201ENSMUST00000118147 391 ntBASIC11.58□□□□□ -0.56
Chd6A3KFM7 Gm26927-201ENSMUST00000182385 965 ntBASIC11.58□□□□□ -0.56
Chd6A3KFM7 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chd6A3KFM7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Dancr-204ENSMUST00000132389 2347 ntBASIC11.57□□□□□ -0.56
Chd6A3KFM7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chd6A3KFM7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Gm11524-201ENSMUST00000119349 807 ntBASIC11.57□□□□□ -0.56
Chd6A3KFM7 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Gm6152-201ENSMUST00000151704 340 ntBASIC11.57□□□□□ -0.56
Chd6A3KFM7 Gm20392-201ENSMUST00000173047 701 ntBASIC11.57□□□□□ -0.56
Chd6A3KFM7 Gm2991-201ENSMUST00000173338 480 ntBASIC11.57□□□□□ -0.56
Chd6A3KFM7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Gm5425-201ENSMUST00000214125 459 ntBASIC11.57□□□□□ -0.56
Chd6A3KFM7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Mir6958-201ENSMUST00000184207 73 ntBASIC11.57□□□□□ -0.56
Chd6A3KFM7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd6A3KFM7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd6A3KFM7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms