Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a4A2AX52 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.17□□□□□ -0.46
Col6a4A2AX52 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.17□□□□□ -0.46
Col6a4A2AX52 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.17□□□□□ -0.46
Col6a4A2AX52 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.17□□□□□ -0.46
Col6a4A2AX52 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a4A2AX52 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Gm12341-201ENSMUST00000119724 503 ntBASIC12.16□□□□□ -0.46
Col6a4A2AX52 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Gm42693-201ENSMUST00000196779 631 ntBASIC12.16□□□□□ -0.46
Col6a4A2AX52 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Gm10478-201ENSMUST00000084451 396 ntBASIC12.16□□□□□ -0.46
Col6a4A2AX52 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.16□□□□□ -0.46
Col6a4A2AX52 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.16□□□□□ -0.46
Col6a4A2AX52 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Gm17420-201ENSMUST00000164753 153 ntBASIC12.16□□□□□ -0.46
Col6a4A2AX52 Gm10766-202ENSMUST00000194123 606 ntBASIC12.16□□□□□ -0.46
Col6a4A2AX52 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a4A2AX52 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a4A2AX52 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms