Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc112A0AUP1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc112A0AUP1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc112A0AUP1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc112A0AUP1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc112A0AUP1 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.52■□□□□ 0.23
Ccdc112A0AUP1 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.52■□□□□ 0.23
Ccdc112A0AUP1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Ccdc112A0AUP1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc112A0AUP1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ccdc112A0AUP1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Gm5177-201ENSMUST00000183092 997 ntBASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Thap2-203ENSMUST00000218989 527 ntBASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc112A0AUP1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Gm37230-201ENSMUST00000194491 818 ntBASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc112A0AUP1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms