Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-5A0A075B6B9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm12644-201ENSMUST00000119935 606 ntBASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav6d-5A0A075B6B9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms