Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Acot6-202ENSMUST00000222921 3622 ntBASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav6n-6A0A075B6B2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm7222-201ENSMUST00000117512 906 ntBASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm13884-201ENSMUST00000118103 829 ntBASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm7862-201ENSMUST00000121461 292 ntBASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 AC161829.1-201ENSMUST00000220298 281 ntBASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm6296-201ENSMUST00000222599 943 ntBASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav6n-6A0A075B6B2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm25990-201ENSMUST00000102440 86 ntBASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Gm15358-201ENSMUST00000119249 520 ntBASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav6n-6A0A075B6B2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms