Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Gm2651-201ENSMUST00000203560 838 ntBASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Gm12350-201ENSMUST00000121208 462 ntBASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav5-4A0A075B652 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Gm23547-201ENSMUST00000158210 271 ntBASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav5-4A0A075B652 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms