Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Gm37055-201ENSMUST00000191866 133 ntBASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Gm18959-201ENSMUST00000208954 655 ntBASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav8-1A0A075B641 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Gm37722-201ENSMUST00000193757 208 ntBASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Gm45058-201ENSMUST00000205810 766 ntBASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav8-1A0A075B641 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav8-1A0A075B641 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav8-1A0A075B641 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms