Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cx3cr1Q9Z0D9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cx3cr1Q9Z0D9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cx3cr1Q9Z0D9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cx3cr1Q9Z0D9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cx3cr1Q9Z0D9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm8749-201ENSMUST00000117737 331 ntBASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm37153-201ENSMUST00000193637 231 ntBASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cx3cr1Q9Z0D9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm4535-201ENSMUST00000182274 558 ntBASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm27357-201ENSMUST00000183754 135 ntBASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm10355-201ENSMUST00000097146 517 ntBASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cx3cr1Q9Z0D9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm14042-201ENSMUST00000120139 833 ntBASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.25□□□□□ -0.45
Cx3cr1Q9Z0D9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms