Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Gm5587-201ENSMUST00000206270 674 ntBASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn5Q9WU28 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.9□□□□□ -0.51
Pfdn5Q9WU28 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pfdn5Q9WU28 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pfdn5Q9WU28 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Pfdn5Q9WU28 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Pfdn5Q9WU28 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Gm11950-201ENSMUST00000121615 838 ntBASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pfdn5Q9WU28 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.88□□□□□ -0.51
Pfdn5Q9WU28 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms