Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp5Q9D7S9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Gm27459-201ENSMUST00000184860 107 ntBASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp5Q9D7S9 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp5Q9D7S9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp5Q9D7S9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Gm2451-201ENSMUST00000199447 999 ntBASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Gm10290-201ENSMUST00000200451 999 ntBASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Olfr286-202ENSMUST00000205305 969 ntBASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Rps4l-201ENSMUST00000071745 943 ntBASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp5Q9D7S9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms