Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.22■□□□□ 0.35
Stag1Q9D3E6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Gm14928-201ENSMUST00000120198 477 ntBASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Gm9794-201ENSMUST00000202370 423 ntBASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Stag1Q9D3E6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Gm6916-202ENSMUST00000205523 195 ntBASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Stag1Q9D3E6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Gm14042-201ENSMUST00000120139 833 ntBASIC17.19■□□□□ 0.34
Stag1Q9D3E6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Gm7653-201ENSMUST00000214567 508 ntBASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stag1Q9D3E6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms