Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shmt2Q9CZN7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Gm2272-201ENSMUST00000194903 582 ntBASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt2Q9CZN7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Gm17271-201ENSMUST00000165535 355 ntBASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Gm5177-201ENSMUST00000183092 997 ntBASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Thap2-203ENSMUST00000218989 527 ntBASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt2Q9CZN7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shmt2Q9CZN7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shmt2Q9CZN7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shmt2Q9CZN7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shmt2Q9CZN7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shmt2Q9CZN7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shmt2Q9CZN7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.83□□□□□ -0.19
Shmt2Q9CZN7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt2Q9CZN7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt2Q9CZN7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms