Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Gm45167-201ENSMUST00000208007 322 ntBASIC14.37□□□□□ -0.11
Ssu72Q9CY97 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ssu72Q9CY97 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Gm2272-201ENSMUST00000194903 582 ntBASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ssu72Q9CY97 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Gm4899-201ENSMUST00000178708 719 ntBASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Gm45747-201ENSMUST00000212203 999 ntBASIC14.35□□□□□ -0.11
Ssu72Q9CY97 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Ssu72Q9CY97 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms