Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf135Q9CWS1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Gm15920-201ENSMUST00000118998 402 ntBASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf135Q9CWS1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.08■□□□□ 0.01
Rnf135Q9CWS1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.08■□□□□ 0
Rnf135Q9CWS1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf135Q9CWS1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.07■□□□□ 0
Rnf135Q9CWS1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Gm11025-201ENSMUST00000140773 466 ntBASIC15.07■□□□□ 0
Rnf135Q9CWS1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf135Q9CWS1 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.07■□□□□ 0
Rnf135Q9CWS1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms