Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm7Q9CQQ8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm7Q9CQQ8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm7Q9CQQ8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Gm27680-201ENSMUST00000184192 160 ntBASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm7Q9CQQ8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Gm15653-201ENSMUST00000119247 907 ntBASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Gm27631-201ENSMUST00000184163 466 ntBASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Mir6977-201ENSMUST00000184960 64 ntBASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Gm45453-201ENSMUST00000211758 853 ntBASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.61□□□□□ -0.07
Lsm7Q9CQQ8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Mir1897-201ENSMUST00000122581 272 ntBASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Dupd1-202ENSMUST00000224735 548 ntBASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Shd-206ENSMUST00000225145 998 ntBASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm7Q9CQQ8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm7Q9CQQ8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm7Q9CQQ8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Lsm7Q9CQQ8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm7Q9CQQ8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm7Q9CQQ8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm7Q9CQQ8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm7Q9CQQ8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm7Q9CQQ8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm7Q9CQQ8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm7Q9CQQ8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms