Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.71□□□□□ -0.37
Scrt1Q99M85 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.71□□□□□ -0.37
Scrt1Q99M85 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scrt1Q99M85 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scrt1Q99M85 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scrt1Q99M85 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.71□□□□□ -0.38
Scrt1Q99M85 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scrt1Q99M85 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Scrt1Q99M85 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Scrt1Q99M85 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Scrt1Q99M85 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scrt1Q99M85 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scrt1Q99M85 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.7□□□□□ -0.38
Scrt1Q99M85 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Gm12134-201ENSMUST00000122109 520 ntBASIC12.7□□□□□ -0.38
Scrt1Q99M85 Gm27680-201ENSMUST00000184192 160 ntBASIC12.7□□□□□ -0.38
Scrt1Q99M85 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.7□□□□□ -0.38
Scrt1Q99M85 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.7□□□□□ -0.38
Scrt1Q99M85 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Gm6180-201ENSMUST00000065243 498 ntBASIC12.7□□□□□ -0.38
Scrt1Q99M85 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scrt1Q99M85 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.7□□□□□ -0.38
Scrt1Q99M85 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.69□□□□□ -0.38
Scrt1Q99M85 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.69□□□□□ -0.38
Scrt1Q99M85 Gm14722-201ENSMUST00000118943 689 ntBASIC12.69□□□□□ -0.38
Scrt1Q99M85 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Mir7085-201ENSMUST00000184353 66 ntBASIC12.69□□□□□ -0.38
Scrt1Q99M85 Gm29667-201ENSMUST00000190817 490 ntBASIC12.69□□□□□ -0.38
Scrt1Q99M85 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.69□□□□□ -0.38
Scrt1Q99M85 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scrt1Q99M85 Efs-202ENSMUST00000227037 2540 ntBASIC12.68□□□□□ -0.38
Scrt1Q99M85 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.68□□□□□ -0.38
Scrt1Q99M85 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scrt1Q99M85 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms