Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Gm21854-201ENSMUST00000179901 471 ntBASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.47□□□□□ -0.09
Cstf1Q99LC2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Gm12742-201ENSMUST00000117326 410 ntBASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Gm45841-201ENSMUST00000207700 164 ntBASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Gm19220-201ENSMUST00000222682 803 ntBASIC14.46□□□□□ -0.09
Cstf1Q99LC2 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cstf1Q99LC2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cstf1Q99LC2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cstf1Q99LC2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cstf1Q99LC2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cstf1Q99LC2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cstf1Q99LC2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cstf1Q99LC2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cstf1Q99LC2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cstf1Q99LC2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Gm5035-201ENSMUST00000215581 927 ntBASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cstf1Q99LC2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Gm45098-201ENSMUST00000207179 657 ntBASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cstf1Q99LC2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms