Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Gm8410-201ENSMUST00000117225 605 ntBASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdha2Q91Y17 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Pcdha2Q91Y17 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Pcdha2Q91Y17 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 AA619741-201ENSMUST00000195095 646 ntBASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Shd-206ENSMUST00000225145 998 ntBASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdha2Q91Y17 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdha2Q91Y17 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.37■□□□□ 0.05
Pcdha2Q91Y17 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdha2Q91Y17 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms