Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm18206-201ENSMUST00000207027 926 ntBASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Mir8117-201ENSMUST00000184773 107 ntBASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb8Q91XZ2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb8Q91XZ2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pcdhb8Q91XZ2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb8Q91XZ2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms