Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usb1Q91W78 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usb1Q91W78 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usb1Q91W78 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usb1Q91W78 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usb1Q91W78 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usb1Q91W78 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Gm14701-201ENSMUST00000117156 348 ntBASIC14.33□□□□□ -0.12
Usb1Q91W78 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.33□□□□□ -0.12
Usb1Q91W78 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
Usb1Q91W78 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.33□□□□□ -0.12
Usb1Q91W78 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.33□□□□□ -0.12
Usb1Q91W78 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.33□□□□□ -0.12
Usb1Q91W78 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.33□□□□□ -0.12
Usb1Q91W78 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.33□□□□□ -0.12
Usb1Q91W78 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usb1Q91W78 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Usb1Q91W78 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usb1Q91W78 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usb1Q91W78 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.32□□□□□ -0.12
Usb1Q91W78 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.32□□□□□ -0.12
Usb1Q91W78 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.32□□□□□ -0.12
Usb1Q91W78 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usb1Q91W78 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.32□□□□□ -0.12
Usb1Q91W78 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.32□□□□□ -0.12
Usb1Q91W78 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.32□□□□□ -0.12
Usb1Q91W78 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.32□□□□□ -0.12
Usb1Q91W78 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.32□□□□□ -0.12
Usb1Q91W78 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usb1Q91W78 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.32□□□□□ -0.12
Usb1Q91W78 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usb1Q91W78 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Usb1Q91W78 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Usb1Q91W78 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Usb1Q91W78 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usb1Q91W78 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.31□□□□□ -0.12
Usb1Q91W78 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Gm9385-201ENSMUST00000117563 472 ntBASIC14.31□□□□□ -0.12
Usb1Q91W78 Gm15920-201ENSMUST00000118998 402 ntBASIC14.31□□□□□ -0.12
Usb1Q91W78 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
Usb1Q91W78 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usb1Q91W78 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Usb1Q91W78 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usb1Q91W78 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.31□□□□□ -0.12
Usb1Q91W78 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.31□□□□□ -0.12
Usb1Q91W78 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.31□□□□□ -0.12
Usb1Q91W78 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Usb1Q91W78 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usb1Q91W78 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.31□□□□□ -0.12
Usb1Q91W78 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usb1Q91W78 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usb1Q91W78 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usb1Q91W78 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms