Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx1Q91V10 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.31□□□□□ -0.12
Vsx1Q91V10 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.31□□□□□ -0.12
Vsx1Q91V10 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.3□□□□□ -0.12
Vsx1Q91V10 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Gm5479-201ENSMUST00000160578 435 ntBASIC14.3□□□□□ -0.12
Vsx1Q91V10 Gm27892-201ENSMUST00000185017 106 ntBASIC14.3□□□□□ -0.12
Vsx1Q91V10 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vsx1Q91V10 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm29310-201ENSMUST00000185468 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21825-201ENSMUST00000185728 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm29109-201ENSMUST00000185895 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21896-201ENSMUST00000186520 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21873-201ENSMUST00000186728 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21794-201ENSMUST00000187056 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21880-201ENSMUST00000187275 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21826-201ENSMUST00000187451 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21198-201ENSMUST00000188393 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21749-201ENSMUST00000189343 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21901-201ENSMUST00000189568 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm29424-201ENSMUST00000189716 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm28599-201ENSMUST00000189838 694 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21867-201ENSMUST00000189917 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm29269-201ENSMUST00000190087 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21722-201ENSMUST00000190153 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm28423-201ENSMUST00000190701 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21899-201ENSMUST00000190745 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21910-201ENSMUST00000191163 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21849-201ENSMUST00000191571 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm28678-201ENSMUST00000191593 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm20910-201ENSMUST00000193268 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm21871-201ENSMUST00000194621 696 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.29□□□□□ -0.12
Vsx1Q91V10 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx1Q91V10 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Gm27631-201ENSMUST00000184163 466 ntBASIC14.28□□□□□ -0.12
Vsx1Q91V10 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Gm45331-201ENSMUST00000209868 554 ntBASIC14.28□□□□□ -0.12
Vsx1Q91V10 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.28□□□□□ -0.12
Vsx1Q91V10 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.28□□□□□ -0.12
Vsx1Q91V10 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms