Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Gm2451-201ENSMUST00000199447 999 ntBASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Gm10290-201ENSMUST00000200451 999 ntBASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Gm5364-201ENSMUST00000216789 889 ntBASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H1fooQ8VIK3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.13□□□□□ -0.47
H1fooQ8VIK3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Gm9727-201ENSMUST00000161387 555 ntBASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Gm45747-201ENSMUST00000212203 999 ntBASIC12.12□□□□□ -0.47
H1fooQ8VIK3 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
H1fooQ8VIK3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms