Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Top1mtQ8R4U6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Top1mtQ8R4U6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Top1mtQ8R4U6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Gm11594-201ENSMUST00000122313 162 ntBASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Top1mtQ8R4U6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Top1mtQ8R4U6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Gm2810-201ENSMUST00000118681 990 ntBASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Gm18737-201ENSMUST00000173594 937 ntBASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Gm27494-201ENSMUST00000184735 189 ntBASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.31■□□□□ 0.36
Top1mtQ8R4U6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Rprl2-201ENSMUST00000157150 290 ntBASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.3■□□□□ 0.36
Top1mtQ8R4U6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms