Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Gm14042-201ENSMUST00000120139 833 ntBASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nup35Q8R4R6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.81□□□□□ -0.52
Nup35Q8R4R6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nup35Q8R4R6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Acot6-202ENSMUST00000222921 3622 ntBASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Gm7787-201ENSMUST00000216858 688 ntBASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nup35Q8R4R6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms