Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cd109Q8R422 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC20.34■□□□□ 0.85
Cd109Q8R422 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cd109Q8R422 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC20.34■□□□□ 0.85
Cd109Q8R422 Gm2495-201ENSMUST00000191160 466 ntBASIC20.34■□□□□ 0.85
Cd109Q8R422 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cd109Q8R422 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cd109Q8R422 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd109Q8R422 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd109Q8R422 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cd109Q8R422 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC20.33■□□□□ 0.85
Cd109Q8R422 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC20.33■□□□□ 0.85
Cd109Q8R422 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd109Q8R422 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cd109Q8R422 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd109Q8R422 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd109Q8R422 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
Cd109Q8R422 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC20.33■□□□□ 0.84
Cd109Q8R422 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC20.33■□□□□ 0.84
Cd109Q8R422 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC20.33■□□□□ 0.84
Cd109Q8R422 Gm18905-201ENSMUST00000205454 928 ntBASIC20.33■□□□□ 0.84
Cd109Q8R422 Gm18307-201ENSMUST00000206864 949 ntBASIC20.33■□□□□ 0.84
Cd109Q8R422 AC155258.1-201ENSMUST00000219303 253 ntBASIC20.33■□□□□ 0.84
Cd109Q8R422 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd109Q8R422 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cd109Q8R422 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cd109Q8R422 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC20.33■□□□□ 0.84
Cd109Q8R422 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cd109Q8R422 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd109Q8R422 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd109Q8R422 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Cd109Q8R422 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cd109Q8R422 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC20.32■□□□□ 0.84
Cd109Q8R422 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Cd109Q8R422 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC20.32■□□□□ 0.84
Cd109Q8R422 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC20.32■□□□□ 0.84
Cd109Q8R422 Gm7446-201ENSMUST00000221035 1240 ntBASIC20.32■□□□□ 0.84
Cd109Q8R422 AC156560.2-201ENSMUST00000221232 264 ntBASIC20.32■□□□□ 0.84
Cd109Q8R422 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd109Q8R422 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Gm10584-201ENSMUST00000207036 2628 ntBASIC20.31■□□□□ 0.84
Cd109Q8R422 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC20.31■□□□□ 0.84
Cd109Q8R422 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC20.31■□□□□ 0.84
Cd109Q8R422 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC20.31■□□□□ 0.84
Cd109Q8R422 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cd109Q8R422 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cd109Q8R422 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.3■□□□□ 0.84
Cd109Q8R422 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cd109Q8R422 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cd109Q8R422 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cd109Q8R422 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cd109Q8R422 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Cd109Q8R422 Gm18062-201ENSMUST00000208020 547 ntBASIC20.3■□□□□ 0.84
Cd109Q8R422 Gm18055-201ENSMUST00000208254 547 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms