Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc58Q8R3Q6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc58Q8R3Q6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc58Q8R3Q6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc58Q8R3Q6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc58Q8R3Q6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc58Q8R3Q6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc58Q8R3Q6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc58Q8R3Q6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.02□□□□□ -0.32
Ccdc58Q8R3Q6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc58Q8R3Q6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc58Q8R3Q6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc58Q8R3Q6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc58Q8R3Q6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms