Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rpp40Q8R1F9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Gm23547-201ENSMUST00000158210 271 ntBASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Shd-206ENSMUST00000225145 998 ntBASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rpp40Q8R1F9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Gm12428-201ENSMUST00000119844 727 ntBASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Gm16476-201ENSMUST00000221544 139 ntBASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rpp40Q8R1F9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Gm13453-201ENSMUST00000118708 357 ntBASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Mir1897-201ENSMUST00000122581 272 ntBASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Gm20949-201ENSMUST00000206478 952 ntBASIC15.47■□□□□ 0.07
Rpp40Q8R1F9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms