Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.1■□□□□ 0.33
Atf7Q8R0S1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Rprl2-201ENSMUST00000157150 290 ntBASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Gm27494-201ENSMUST00000184735 189 ntBASIC17.09■□□□□ 0.33
Atf7Q8R0S1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atf7Q8R0S1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf7Q8R0S1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf7Q8R0S1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Atf7Q8R0S1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf7Q8R0S1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.08■□□□□ 0.33
Atf7Q8R0S1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.08■□□□□ 0.33
Atf7Q8R0S1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf7Q8R0S1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf7Q8R0S1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf7Q8R0S1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atf7Q8R0S1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf7Q8R0S1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atf7Q8R0S1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atf7Q8R0S1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atf7Q8R0S1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.08■□□□□ 0.32
Atf7Q8R0S1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf7Q8R0S1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Atf7Q8R0S1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atf7Q8R0S1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf7Q8R0S1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf7Q8R0S1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atf7Q8R0S1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.07■□□□□ 0.32
Atf7Q8R0S1 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.07■□□□□ 0.32
Atf7Q8R0S1 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.07■□□□□ 0.32
Atf7Q8R0S1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atf7Q8R0S1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms