Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Gm15240-201ENSMUST00000118156 720 ntBASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx54Q8K4L0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Gm15808-201ENSMUST00000119046 604 ntBASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Gm22331-201ENSMUST00000158066 136 ntBASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Gm18753-201ENSMUST00000201000 566 ntBASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Gm3695-201ENSMUST00000087222 1009 ntBASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx54Q8K4L0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Gm15376-201ENSMUST00000122258 783 ntBASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Gm19309-201ENSMUST00000218295 205 ntBASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Gm12846-201ENSMUST00000120431 1373 ntBASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx54Q8K4L0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Gm13612-201ENSMUST00000119276 390 ntBASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Gm27501-201ENSMUST00000183599 107 ntBASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 AC132317.1-201ENSMUST00000227227 962 ntBASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx54Q8K4L0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx54Q8K4L0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx54Q8K4L0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx54Q8K4L0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Ddx54Q8K4L0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Ddx54Q8K4L0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.77■□□□□ 0.59
Ddx54Q8K4L0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx54Q8K4L0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ddx54Q8K4L0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ddx54Q8K4L0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms