Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shtn1Q8K2Q9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Mir1982-201ENSMUST00000157368 74 ntBASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Olfr286-202ENSMUST00000205305 969 ntBASIC17.02■□□□□ 0.32
Shtn1Q8K2Q9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shtn1Q8K2Q9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Gm8749-201ENSMUST00000117737 331 ntBASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Gm27701-201ENSMUST00000184498 110 ntBASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Shtn1Q8K2Q9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Gm19220-201ENSMUST00000222682 803 ntBASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shtn1Q8K2Q9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Gm4984-201ENSMUST00000115987 360 ntBASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Gm12957-201ENSMUST00000117835 377 ntBASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.99■□□□□ 0.31
Shtn1Q8K2Q9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms