Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn1Q8K0T0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rtn1Q8K0T0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Gm13015-201ENSMUST00000118674 204 ntBASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Gm26308-201ENSMUST00000157768 69 ntBASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtn1Q8K0T0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rtn1Q8K0T0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rtn1Q8K0T0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rtn1Q8K0T0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rtn1Q8K0T0 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtn1Q8K0T0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtn1Q8K0T0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms