Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm11745-201ENSMUST00000121669 448 ntBASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rfwd3Q8CIK8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Gm11543-201ENSMUST00000120758 370 ntBASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Gm18737-201ENSMUST00000173594 937 ntBASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Chchd1-203ENSMUST00000224633 557 ntBASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rfwd3Q8CIK8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Gm23935-201ENSMUST00000102303 57 ntBASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Gm24270-201ENSMUST00000102326 57 ntBASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Gm13365-201ENSMUST00000121188 973 ntBASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Gm24245-201ENSMUST00000157318 57 ntBASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Gm43575-201ENSMUST00000196420 516 ntBASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfwd3Q8CIK8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rfwd3Q8CIK8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms