Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 AC140930.3-201ENSMUST00000222935 274 ntBASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm6365-201ENSMUST00000054711 744 ntBASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm6139-201ENSMUST00000079261 882 ntBASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Hist3h2bbQ8CGP0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm6211-202ENSMUST00000167849 925 ntBASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm43017-201ENSMUST00000198296 752 ntBASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.92□□□□□ -0.66
Hist3h2bbQ8CGP0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms