Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Gm13823-201ENSMUST00000119930 345 ntBASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
Rbm28Q8CGC6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Gm13464-201ENSMUST00000119418 935 ntBASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Mir8102-201ENSMUST00000184148 139 ntBASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Gm27989-201ENSMUST00000184721 107 ntBASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbm28Q8CGC6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Gm14767-201ENSMUST00000121559 586 ntBASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Gm27437-201ENSMUST00000183429 107 ntBASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Mir7684-201ENSMUST00000183858 60 ntBASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.1■□□□□ 0.33
Rbm28Q8CGC6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbm28Q8CGC6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rbm28Q8CGC6 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms