Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Gm12895-201ENSMUST00000122214 226 ntBASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Gm11780-201ENSMUST00000136880 516 ntBASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc28bQ8CEG5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Gm27357-201ENSMUST00000183754 135 ntBASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccdc28bQ8CEG5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Gm12644-201ENSMUST00000119935 606 ntBASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.3□□□□□ -0.12
Ccdc28bQ8CEG5 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms