Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vcpip1Q8CDG3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Vcpip1Q8CDG3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Vcpip1Q8CDG3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Gm4995-201ENSMUST00000117247 432 ntBASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Gm13464-201ENSMUST00000119418 935 ntBASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Gm9726-201ENSMUST00000180321 678 ntBASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vcpip1Q8CDG3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Gm9727-201ENSMUST00000161387 555 ntBASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Gm16026-204ENSMUST00000162652 683 ntBASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vcpip1Q8CDG3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vcpip1Q8CDG3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms