Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc60Q8C4J0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Mir449b-201ENSMUST00000104833 80 ntBASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Gm14042-201ENSMUST00000120139 833 ntBASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Gm5779-201ENSMUST00000218467 910 ntBASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Ccdc60Q8C4J0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Gm7774-201ENSMUST00000200064 533 ntBASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc60Q8C4J0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ccdc60Q8C4J0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Gm10253-201ENSMUST00000194270 940 ntBASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc60Q8C4J0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.44■□□□□ 0.54
Ccdc60Q8C4J0 Gm13823-201ENSMUST00000119930 345 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms